STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_449Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:PABB_LACLA AC:P27629, p()=0.99, pid=15%. (120 aa)    
Predicted Functional Partners:
MTH_448
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g1698878 LN:MMU73378, p()=0.99, pid=12%.
     0.988
MTH_450
LPS biosynthesis RfbU related protein; Function Code:11.04 - Cell envelope, Murein sacculus and peptidoglycan; similar to, sp:LN:YV12_MYCTU AC:Q11152, p()=4E-30, pid=25%.
       0.773
MTH_451
Magnesium chelatase subunit ChlI; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, pir:LN:G64413 AC:G64413, p()=2.6E-99, pid=32%.
       0.490
MTH_447
Sensory transduction regulatory protein; Function Code:12.12 - Cell Processes, Broad regulatory functions; similar to, gp:GI:g1652473 LN:D90905, p()=5.5E-26, pid=20%.
       0.488
MTH_452
Unknown; Function Code:14.00 - Unknown.
       0.408
MTH_453
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:B64496 AC:B64496, p()=0.00012, pid=23%.
       0.408
MTH_454
Methyl coenzyme M reductase system, component A2 homolog; Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, pir:LN:D64507 AC:D64507, p()=1.2E-35, pid=50%.
       0.408
MTH_455
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:e218019:g1154782, p()=0.31, pid=09%.
       0.408
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.