STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_485Unknown; Function Code:14.00 - Unknown; similar to, pir:LN:S51725 AC:S51725, p()=0.012, pid=24%. (58 aa)    
Predicted Functional Partners:
MTH_487
DNA helicase related protein; Function Code:10.02 - Metabolism of Macromolecules, Transcription--mRNA synthesis and modification (includes regulators); similar to, sp:LN:Y140_MYCGE AC:P47386, p()=1.1E-47, pid=17%.
      0.933
MTH_486
Unknown; Function Code:14.00 - Unknown; similar to, pir:LN:D29585 AC:D29585, p()=0.9993, pid=06%.
      0.929
MTH_488
Unknown; Function Code:14.00 - Unknown; similar to, pir:LN:A24829 AC:A24829, p()=0.24, pid=07%.
      0.921
MTH_489
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g1276470 LN:GCU24068, p()=0.54, pid=11%.
       0.562
MTH_490
Unknown; Function Code:14.00 - Unknown; similar to, gp_new:GI:g2072778 LN:MMU47023, p()=0.54, pid=08%.
       0.562
MTH_491
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:YPRB_BACSU AC:P50837, p()=7.9E-19, pid=20%.
       0.531
MTH_492
ATP-dependent RNA helicase, eIF-4A family; Function Code:10.07 - Metabolism of Macromolecules, Aminoacyl tRNA synthetases and tRNA modification; similar to, sp:LN:YPRA_BACSU AC:P50830, p()=1.3E-111, pid=31%.
       0.449
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.