STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_545Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1272330 LN:MTU51624, p()=0.000017, pid=10%. (437 aa)    
Predicted Functional Partners:
MTH_1826
Unknown (contains ferredoxin domain); Function Code:14.00 - Unknown; similar to, pir:LN:A42960 AC:A42960, p()=0.0045, pid=08%.
   
    0.589
MTH_546
Cationic amino acid transporter related protein; Function Code:12.01 - Cell Processes, Transport of amino acids--peptides and amines; similar to, sp:LN:YW19_MYCTU AC:Q10858, p()=2.7E-19, pid=22%.
  
    0.585
MTH_544
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1402531 LN:D78257, p()=8.1E-16, pid=31%; Belongs to the UPF0145 family.
       0.497
MTH_543
Unknown; Function Code:14.00 - Unknown; similar to, pir:LN:A56858 AC:A56858, p()=0.95, pid=11%.
  
    0.467
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.