STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_555Magnesium chelatase subunit; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, gp:GI:g1651860 LN:D90900, p()=3.6E-18, pid=29%. (182 aa)    
Predicted Functional Partners:
MTH_556
Magnesium chelatase subunit ChlI; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, pir:LN:G64413 AC:G64413, p()=1.7E-93, pid=45%.
 
 0.998
MTH_451
Magnesium chelatase subunit ChlI; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, pir:LN:G64413 AC:G64413, p()=2.6E-99, pid=32%.
 
 
0.952
MTH_554
Conserved protein; Probable pre-rRNA processing protein involved in ribosome biogenesis; Belongs to the TSR3 family.
       0.623
MTH_456
Magnesium chelatase subunit; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, gp:GI:g1652115 LN:D90902, p()=5.1E-144, pid=34%.
 
  
 0.617
rpl40e
Ribosomal protein L40; Function Code:10.04 - Metabolism of Macromolecules, Ribosomal proteins; similar to, sp:LN:RL40_METJA AC:P54058, p()=5.1E-14, pid=55%; Belongs to the eukaryotic ribosomal protein eL40 family.
     
 0.614
MTH_237
Magnesium chelatase subunit; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, pir:LN:S64721 AC:S64721, p()=1E-97, pid=24%.
 
  
 0.558
MTH_552
Conserved protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids; Belongs to the GGGP/HepGP synthase family. Group II subfamily.
       0.534
MTH_514
Cobalamin biosynthesis protein N; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, pir:LN:D64413 AC:D64413, p()=1.5E-91, pid=22%.
 
  
 0.519
MTH_1363
Cobalamin biosynthesis protein N; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, pir:LN:D64413 AC:D64413, p()=1.7E-171, pid=40%.
 
  
 0.479
MTH_351
Magnesium chelatase subunit; Function Code:9.10 - Metabolism of Cofactors and Vitamins, Porphyrin and chlorophyll metabolism; similar to, sp:LN:BCHH_RHOCA AC:P26162, p()=8.2E-96, pid=22%.
 
  
 0.427
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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