STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_568Unknown; Function Code:14.00 - Unknown. (64 aa)    
Predicted Functional Partners:
htpX
Heat shock protein X; Function Code:12.06 - Cell Processes, Chaperones; similar to, pir:LN:H64509 AC:H64509, p()=1.1E-36, pid=38%; Belongs to the peptidase M48B family.
      0.932
MTH_1382
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:F64428 AC:F64428, p()=3.7E-20, pid=24%.
  
  
 0.755
MTH_1235
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:A64482 AC:A64482, p()=6.1E-50, pid=51%.
  
    0.734
MTH_577
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:A64421 AC:A64421, p()=2.4E-32, pid=31%.
  
    0.724
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.685
MTH_1502
Succinate dehydrogenase, flavoprotein subunit; Function Code:1.02 - Carbohydrate Metabolism, Citrate cycle (TCA cycle); similar to, sp:LN:Y033_METJA AC:Q60356, p()=2.9E-139, pid=51%.
  
  
 0.550
rpl4
Ribosomal protein L4 (E.coli); One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
  
 
 0.533
MTH_1648
Dihydrolipoamide dehydrogenase; Function Code:1.01 - Carbohydrate Metabolism, Glycolysis--Gluconeogenesis; similar to, pir:LN:D64379 AC:D64379, p()=8.1E-48, pid=31%.
  
  
 0.500
ilvD
Dihydroxy-acid dehydratase; Function Code:5.06 - L-Amino Acid Metabolism, Valine--leucine and isoleucine biosynthesis; similar to, pir:LN:C64459 AC:C64459, p()=2.6E-184, pid=56%; Belongs to the IlvD/Edd family.
  
 
 0.496
MTH_1814
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:e280508:g1666159, p()=5.6E-56, pid=38%.
  
  
 0.484
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.