STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_604Adhesion protein; Function Code:13.08 - Other, Adhesion; similar to, gp:GI:g1652186 LN:D90903, p()=2.7E-47, pid=33%. (295 aa)    
Predicted Functional Partners:
MTH_605
ABC transporter; Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, gp:GI:g1652187 LN:D90903, p()=6.6E-53, pid=42%.
 
 
 0.999
MTH_606
Manganese transport system membrane protein; Function Code:12.05 - Cell Processes, Transport of cations; similar to, gp:GI:g1652188 LN:D90903, p()=4.7E-52, pid=39%.
 
 
 0.999
rps14
Ribosomal protein S29 (E.coli); Binds 16S rRNA, required for the assembly of 30S particles.
  
  
 0.818
MTH_1074
Putative membrane protein; Function Code:11.01 - Cell envelope, Membrane proteins--porins--and lipoproteins; similar to, sp:LN:YPZ5_METTF AC:P29579, p()=2.9E-37, pid=54%.
      
 0.812
MTH_473
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1707057, p()=1.7E-49, pid=38%.
    
 0.763
MTH_603
Conserved protein; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
     
 0.610
mptA
Conserved protein; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
  
  
 0.534
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
     
 0.512
MTH_936
Iron repressor; Function Code:10.02 - Metabolism of Macromolecules, Transcription--mRNA synthesis and modification (includes regulators); similar to, pir:LN:H64370 AC:H64370, p()=1.3E-17, pid=28%.
  
  
 0.493
MTH_214
Iron repressor; Function Code:10.02 - Metabolism of Macromolecules, Transcription--mRNA synthesis and modification (includes regulators); similar to, gp:GI:g1171107 LN:MTU14191, p()=2.3E-20, pid=29%.
  
  
 0.486
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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