STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_605ABC transporter; Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, gp:GI:g1652187 LN:D90903, p()=6.6E-53, pid=42%. (250 aa)    
Predicted Functional Partners:
MTH_604
Adhesion protein; Function Code:13.08 - Other, Adhesion; similar to, gp:GI:g1652186 LN:D90903, p()=2.7E-47, pid=33%.
 
 
 0.999
MTH_606
Manganese transport system membrane protein; Function Code:12.05 - Cell Processes, Transport of cations; similar to, gp:GI:g1652188 LN:D90903, p()=4.7E-52, pid=39%.
 0.999
MTH_603
Conserved protein; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
     
 0.667
MTH_1645
ABC transporter; Function Code:12.02 - Cell Processes, Transport of carbohydrates organic acids alcohols and lipids; similar to, pir:LN:S38903 AC:S38903, p()=5E-64, pid=27%.
      0.568
MTH_1022
Biopolymer transport protein; Function Code:12.01 - Cell Processes, Transport of amino acids--peptides and amines; similar to, gp:GI:g1001752, p()=4.6E-13, pid=19%.
  
  
 0.535
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.535
MTH_671
Unknown; Function Code:14.00 - Unknown; similar to, pir:LN:D64374 AC:D64374, p()=0.089, pid=10%.
  
  
 0.535
MTH_175
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:F64383 AC:F64383, p()=1.4E-41, pid=27%.
 
     0.521
MTH_936
Iron repressor; Function Code:10.02 - Metabolism of Macromolecules, Transcription--mRNA synthesis and modification (includes regulators); similar to, pir:LN:H64370 AC:H64370, p()=1.3E-17, pid=28%.
  
  
 0.487
MTH_1010
Endonuclease IV; Function Code:10.11 - Metabolism of Macromolecules, DNA degradation--restriction/modification; similar to, sp:LN:Y133_METJA AC:Q57597, p()=1.2E-32, pid=25%.
  
    0.480
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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