STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_656ATP-dependent RNA helicase related protein; Function Code:10.02 - Metabolism of macromolecules, Transcription, mRNA synthesis and modification (includes regulators; similar to, pir:LN:H64474 AC:H64474, p()=1.3E-125, pid=34%. (837 aa)    
Predicted Functional Partners:
MTH_657
long-chain-fatty-acid-CoA ligase; Function Code:3.01 - Lipid Metabolism, Fatty acid biosynthesis; similar to, gp:GI:e276127:g1627854, p()=3.2E-101, pid=37%.
       0.759
MTH_763
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64449 AC:E64449, p()=1E-189, pid=59%.
  
    0.703
mutS2
DNA mismatch recognition protein MutS; Has ATPase and non-specific DNA-binding activities. Belongs to the DNA mismatch repair MutS family. Archaeal Muts2 subfamily.
  
     0.569
MTH_659
Epoxidase; Function Code:13.07 - Other, Unclassified; similar to, pir:LN:S60215 AC:S60215, p()=6.1E-11, pid=28%.
       0.528
MTH_658
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:YSMA_BACSU AC:P11469, p()=0.13, pid=19%.
       0.519
MTH_1768
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:H64505 AC:H64505, p()=1.4E-41, pid=30%.
  
     0.461
rnp3
Conserved protein; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
  
     0.461
MTH_1665
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64427 AC:E64427, p()=3.6E-38, pid=33%.
  
     0.453
MTH_967
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:C64445 AC:C64445, p()=6.7E-44, pid=34%.
  
     0.440
MTH_650
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:G64478 AC:G64478, p()=3.3E-35, pid=44%.
  
     0.438
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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