STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTH_656ATP-dependent RNA helicase related protein; Function Code:10.02 - Metabolism of macromolecules, Transcription, mRNA synthesis and modification (includes regulators; similar to, pir:LN:H64474 AC:H64474, p()=1.3E-125, pid=34%. (837 aa)    
Predicted Functional Partners:
MTH_657
long-chain-fatty-acid-CoA ligase; Function Code:3.01 - Lipid Metabolism, Fatty acid biosynthesis; similar to, gp:GI:e276127:g1627854, p()=3.2E-101, pid=37%.
       0.759
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily.
       0.714
MTH_763
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64449 AC:E64449, p()=1E-189, pid=59%.
  
    0.701
MTH_163
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:F64369 AC:F64369, p()=1.2E-51, pid=40%.
 
     0.624
MTH_816
Sporulation protein IVFB related protein; Function Code:13.07 - Other, Unclassified; similar to, pir:LN:H64348 AC:H64348, p()=5.1E-46, pid=33%.
       0.596
mutS2
DNA mismatch recognition protein MutS; Has ATPase and non-specific DNA-binding activities. Belongs to the DNA mismatch repair MutS family. Archaeal Muts2 subfamily.
  
     0.569
MTH_659
Epoxidase; Function Code:13.07 - Other, Unclassified; similar to, pir:LN:S60215 AC:S60215, p()=6.1E-11, pid=28%.
       0.530
MTH_658
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:YSMA_BACSU AC:P11469, p()=0.13, pid=19%.
       0.519
MTH_1523
Glucose-1-phosphate adenylyltransferase related protein; Function Code:4.03 - Nucleotide Metabolism, Nucleotide sugars metabolism; similar to, sp:LN:MPG1_YEAST AC:P41940, p()=2E-21, pid=20%.
       0.508
MTH_1768
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:H64505 AC:H64505, p()=1.4E-41, pid=30%.
  
     0.461
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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