STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_659Epoxidase; Function Code:13.07 - Other, Unclassified; similar to, pir:LN:S60215 AC:S60215, p()=6.1E-11, pid=28%. (190 aa)    
Predicted Functional Partners:
MTH_658
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:YSMA_BACSU AC:P11469, p()=0.13, pid=19%.
  
  
 0.847
MTH_657
long-chain-fatty-acid-CoA ligase; Function Code:3.01 - Lipid Metabolism, Fatty acid biosynthesis; similar to, gp:GI:e276127:g1627854, p()=3.2E-101, pid=37%.
  
  
 0.707
MTH_656
ATP-dependent RNA helicase related protein; Function Code:10.02 - Metabolism of macromolecules, Transcription, mRNA synthesis and modification (includes regulators; similar to, pir:LN:H64474 AC:H64474, p()=1.3E-125, pid=34%.
       0.528
MTH_660
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:RPO2_VACCV AC:P19798, p()=0.99995, pid=13%.
       0.449
MTH_661
Ammonium transporter; Function Code:2.06 - Energy Metabolism, Nitrogen metabolism; similar to, sp:LN:NRGA_BACSU AC:Q07429, p()=2.6E-67, pid=33%.
     
 0.429
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.