STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_693Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:e264115:g1524233, p()=0.0000017, pid=26%. (146 aa)    
Predicted Functional Partners:
MTH_692
Stomatin-like protein; Function Code:11.01 - Cell envelope, Membrane proteins--porins--and lipoproteins; similar to, gp:GI:e264116:g1524234, p()=1.3E-54, pid=39%.
 
  
 0.950
cobS
Cobalamin (5'-phosphate) synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
  
    0.781
MTH_694
Unknown; Function Code:14.00 - Unknown; similar to, pir:LN:A64334 AC:A64334, p()=0.0033, pid=11%.
       0.568
MTH_691
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:F64392 AC:F64392, p()=1.2E-30, pid=47%.
       0.516
cbiH
Precorrin-3 methylase; Methyltransferase that likely catalyzes the ring contraction and methylation of C-17 in cobalt-factor III to form cobalt-factor IV. May also convert cobalt-precorrin-3 to cobalt-precorrin-4 (By similarity).
  
    0.511
MTH_695
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:YF07_METJA AC:Q58902, p()=6.9E-18, pid=19%.
 
    0.480
cbiJ
Cobalamin biosynthesis protein J; Catalyzes the reduction of the macrocycle of cobalt- precorrin-6A to cobalt-precorrin-6B.
  
    0.477
cbiD
Cobalamin biosynthesis protein D; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
    0.461
MTH_1780
Stomatin-like protein; Function Code:11.01 - Cell envelope, Membrane proteins--porins--and lipoproteins; similar to, gp:GI:g1280125, p()=4E-39, pid=27%.
  
  
 0.455
MTH_696
ABC transporter (glutamine transport ATP-binding protein); Function Code:12.01 - Cell Processes, Transport of amino acids--peptides and amines; similar to, pir:LN:D64399 AC:D64399, p()=1.1E-43, pid=39%.
 
    0.453
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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