STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_920Anion permease; Function Code:12.04 - Cell Processes, Transport of anions; similar to, sp:LN:POTG_ECOLI AC:P31134, p()=7.3E-47, pid=30%. (357 aa)    
Predicted Functional Partners:
MTH_921
Anion transport system permease protein; Function Code:12.04 - Cell Processes, Transport of anions; similar to, sp:LN:MBPY_MARPO AC:P26246, p()=3.7E-20, pid=20%.
 0.999
MTH_924
Molybdate-binding periplasmic protein; Function Code:12.04 - Cell Processes, Transport of anions; similar to, pir:LN:B64127 AC:B64127, p()=2.5E-30, pid=28%.
 
  
  0.960
MTH_922
Unknown; Function Code:14.00 - Unknown; similar to, sp:LN:GCH2_HAEIN AC:P44571, p()=0.43, pid=18%.
 
     0.803
MTH_925
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:D64362 AC:D64362, p()=0.000000018, pid=17%.
 
    0.684
MTH_923
Unknown; Function Code:14.00 - Unknown; similar to, pir:LN:D64440 AC:D64440, p()=0.0012, pid=17%.
       0.580
rpl2
Ribosomal protein L8 (E.coli); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
 
     0.541
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily.
 
     0.492
MTH_926
Tungsten formylmethanofuran dehydrogenase, subunit F homolog; Function Code:2.02 - Energy Metabolism, Methane metabolism; similar to, pir:LN:S57453 AC:S57453, p()=3.8E-66, pid=41%.
       0.481
MTH_927
Ferredoxin; Function Code:2.08 - Energy Metabolism, Electron transport; similar to, pir:LN:H64377 AC:H64377, p()=0.0000011, pid=24%.
       0.473
rps5
Ribosomal protein S2 (E.coli); With S4 and S12 plays an important role in translational accuracy.
 
     0.443
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.