STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_965Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:YXEQ_BACSU AC:P54956, p()=1.1E-25, pid=27%. (452 aa)    
Predicted Functional Partners:
MTH_962
Citrate synthase I; Function Code:1.02 - Carbohydrate Metabolism, Citrate cycle (TCA cycle); similar to, sp:LN:CYSZ_CUCMA AC:P49299, p()=6.4E-16, pid=30%.
 
  
 0.923
MTH_964
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:e225470:g1213611, p()=0.98, pid=03%.
 
     0.895
MTH_963
Fumarate hydratase, class I related protein; Function Code:1.02 - Carbohydrate Metabolism, Citrate cycle (TCA cycle); similar to, pir:LN:E64461 AC:E64461, p()=0.0000095, pid=16%.
 
  
 0.859
MTH_1726
Citrate synthase I; Function Code:1.02 - Carbohydrate Metabolism, Citrate cycle (TCA cycle); similar to, sp:LN:CYSZ_CUCMA AC:P49299, p()=1.6E-15, pid=28%.
 
  
 0.845
tiaS
Conserved protein; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
       0.780
MTH_476
Pyruvate dehydrogenase / acetolactate synthase; Function Code:1.08 - Carbohydrate Metabolism, Pyruvate and acetyl-CoA metabolism; similar to, gp:GI:g1881244 LN:AB001488, p()=1.8E-84, pid=32%; Belongs to the TPP enzyme family.
     
 0.659
atpC
ATP synthase, subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
     
 0.649
comA
Conserved protein; Catalyzes the addition of sulfite to phosphoenolpyruvate (PEP) to yield (2R)-phospho-3-sulfolactate (PSL).
  
  
 0.623
MTH_967
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:C64445 AC:C64445, p()=6.7E-44, pid=34%.
       0.580
tuf
Translation elongation factor, EF-1 alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
   
 0.572
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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