STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTH_989Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:e275147:g1621258, p()=7.2E-15, pid=33%. (123 aa)    
Predicted Functional Partners:
MTH_988
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1439554 LN:RLU39409, p()=5.3E-12, pid=23%.
     0.989
MTH_987
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64436 AC:E64436, p()=1.3E-58, pid=36%.
 
  
 0.928
MTH_986
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:C64376 AC:C64376, p()=3.1E-32, pid=32%.
       0.549
MTH_990
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, gp:GI:g1652988 LN:D90910, p()=7.4E-22, pid=21%.
       0.522
MTH_1316
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:E64443 AC:E64443, p()=4E-30, pid=31%; Belongs to the UPF0215 family.
  
     0.416
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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