STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTH_992Inosine-5'-monophosphate dehydrogenase related protein IX; Function Code:4.01 - Nucleotide Metabolism, Purine metabolism; similar to, pir:LN:B48868 AC:B48868, p()=1.9E-16, pid=14%. (284 aa)    
Predicted Functional Partners:
MTH_994
N-ethylammeline chlorohydrolase related protein; Function Code:13.07 - Other, Unclassified; similar to, pir:LN:C64387 AC:C64387, p()=1.3E-49, pid=35%; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
  
    0.904
rpl13/rps9
Ribosomal protein S16 (E.coli); L13 protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity).
  
 
 0.886
MTH_993
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, pir:LN:C64366 AC:C64366, p()=4.6E-29, pid=46%.
  
  
 0.804
MTH_991
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:g1877428 LN:SPU40453, p()=0.49, pid=07%.
       0.790
MTH_740
Conserved protein; Function Code:14.01 - Unknown, Conserved protein; similar to, sp:LN:IMDH_METKA AC:P50100, p()=6.8E-12, pid=43%.
 
    0.760
MTH_235
Riboflavin-specific deaminase; Catalyzes an early step in riboflavin biosynthesis, the NADPH-dependent reduction of the ribose side chain of 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate, yielding 2,5-diamino-6- ribitylamino-4(3H)-pyrimidinone 5'-phosphate.
  
  
 0.743
glyS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly).
     
 0.720
MTH_1903
Unknown; Function Code:14.00 - Unknown; similar to, gp:GI:e284341:g1771850, p()=0.00029, pid=17%.
  
 0.710
rpl4
Ribosomal protein L4 (E.coli); One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
  
 
 0.672
rps12
Ribosomal protein S23 (E.coli); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
 
 
 0.660
Your Current Organism:
Methanothermobacter thermautotrophicus
NCBI taxonomy Id: 187420
Other names: M. thermautotrophicus str. Delta H, Methanobacterium thermoautotrophicum str. Delta H, Methanobacterium thermoautotrophicum str. deltaH, Methanothermobacter thermautotrophicus str. Delta H, Methanothermobacter thermautotrophicus str. deltaH
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