STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALD13667.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)    
Predicted Functional Partners:
ALD13666.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.799
ALD13668.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.796
ALD13504.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
ALD11571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
ALD13665.1
Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.673
ALD13583.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
ALD12994.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.625
ALD12465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
ALD12858.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.609
ALD14301.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
Your Current Organism:
Clavibacter michiganensis capsici
NCBI taxonomy Id: 1874630
Other names: C. michiganensis subsp. capsici, Clavibacter capsici nom. illegit., Clavibacter michiganensis subsp. capsici, Clavibacter michiganensis subsp. capsici Oh et al. 2016, KACC 18448, LMG 29047, LMG:29047, strain PF008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.