STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR66913.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)    
Predicted Functional Partners:
APR66912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family.
       0.709
APR67279.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
APR66915.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.638
APR66914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.636
APR66154.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
APR67150.1
Hypothetical protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.606
APR68150.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
APR66841.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
APR68726.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.483
APR68620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
Your Current Organism:
Thalassolituus oleivorans
NCBI taxonomy Id: 187493
Other names: DSM 14913, LMG 21420, LMG:21420, T. oleivorans, Thalassolituus oleivorans Yakimov et al. 2004, strain MIL-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.