STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC12133.1Stress-induced acidophilic repeat motif-containing protein. (94 aa)    
Predicted Functional Partners:
SDD91038.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.514
SDC49347.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
  
 0.459
SDC79775.1
Hypothetical protein.
   
  
 0.459
SDE57084.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
   
  
 0.459
SDD31118.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.444
SDD44777.1
Catalase; Belongs to the catalase family.
   
  
 0.444
SDD06625.1
Osmotically inducible protein OsmC.
   
    0.441
SDD06771.1
Organic hydroperoxide reductase OsmC/OhrA.
   
    0.441
SDE73350.1
Peroxiredoxin, Ohr subfamily.
   
    0.441
SDC12088.1
Hypothetical protein.
       0.420
Your Current Organism:
Acidovorax valerianellae
NCBI taxonomy Id: 187868
Other names: A. valerianellae, Acidivorax valerianellae, Acidovorax valerianellae Gardan et al. 2003, CFBP 4730, DSM 16619, NCPPB 4283
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