STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC17746.1Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-). (256 aa)    
Predicted Functional Partners:
SDC17799.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.998
SDE25796.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.977
SDC98281.1
Polar amino acid transport system permease protein.
 0.967
SDE25834.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.966
SDD24900.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.959
SDE57713.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.952
SDC16332.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
 0.945
SDC16377.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 0.945
SDD47248.1
Polar amino acid transport system permease protein.
 0.945
SDC98239.1
Polar amino acid transport system permease protein.
 0.940
Your Current Organism:
Acidovorax valerianellae
NCBI taxonomy Id: 187868
Other names: A. valerianellae, Acidivorax valerianellae, Acidovorax valerianellae Gardan et al. 2003, CFBP 4730, DSM 16619, NCPPB 4283
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.