STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC18440.1Anti-sigma regulatory factor (Ser/Thr protein kinase). (351 aa)    
Predicted Functional Partners:
SDC18274.1
rsbT co-antagonist protein RsbR.
 
 0.999
SDC18323.1
rsbT antagonist protein RsbS.
 
 0.999
SDE68424.1
Two-component system, unclassified family, sensor histidine kinase and response regulator.
  
 
 0.997
SDE73116.1
Signal transduction histidine kinase.
  
 
 0.997
SDD31355.1
Hypothetical protein.
 
 
 0.996
SDC11226.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.990
SDE01353.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.987
SDC18372.1
Serine/threonine-protein kinase RsbT.
 
0.986
SDC03378.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.985
SDD58605.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.985
Your Current Organism:
Acidovorax valerianellae
NCBI taxonomy Id: 187868
Other names: A. valerianellae, Acidivorax valerianellae, Acidovorax valerianellae Gardan et al. 2003, CFBP 4730, DSM 16619, NCPPB 4283
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