STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC44144.1Integrating conjugative element protein, PFL_4711 family. (466 aa)    
Predicted Functional Partners:
SDC44090.1
Integrating conjugative element protein, PFL_4710 family.
 
     0.961
SDC44255.1
Hypothetical protein.
       0.861
SDC44036.1
Integrating conjugative element protein, PFL_4709 family.
       0.843
SDC44198.1
Phosphoadenosine phosphosulfate reductase family protein.
 
     0.833
SDC42791.1
Conjugative transfer ATPase, PFL_4706 family.
 
 
   0.822
SDC37598.1
TraG-like protein, N-terminal region.
 
     0.815
SDC42503.1
Integrating conjugative element membrane protein, PFL_4702 family.
 
     0.800
SDC42641.1
Integrating conjugative element protein, PFL_4704 family.
 
     0.800
SDC42694.1
Integrating conjugative element protein, PFL_4705 family.
 
     0.800
SDC42732.1
Conjugative transfer region lipoprotein, TIGR03751 family.
 
     0.800
Your Current Organism:
Acidovorax valerianellae
NCBI taxonomy Id: 187868
Other names: A. valerianellae, Acidivorax valerianellae, Acidovorax valerianellae Gardan et al. 2003, CFBP 4730, DSM 16619, NCPPB 4283
Server load: low (18%) [HD]