STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC73356.1FAD/FMN-containing dehydrogenase. (1304 aa)    
Predicted Functional Partners:
SDD25218.1
Glutamate synthase (NADH) large subunit.
    
 0.981
SDC52021.1
L-lactate dehydrogenase (cytochrome).
  
 0.939
SDE70199.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
  
 0.939
SDD04667.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.938
SDD60004.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.938
SDE34499.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.935
SDC50058.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
 0.920
SDD99902.1
Glycerol-3-phosphate dehydrogenase.
  
 
 0.907
SDC45808.1
Cysteine sulfinate desulfinase/cysteine desulfurase.
    
 0.897
SDC06935.1
Rhodanese-related sulfurtransferase.
    
 0.894
Your Current Organism:
Acidovorax valerianellae
NCBI taxonomy Id: 187868
Other names: A. valerianellae, Acidivorax valerianellae, Acidovorax valerianellae Gardan et al. 2003, CFBP 4730, DSM 16619, NCPPB 4283
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