STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD82204.1Ammonium transporter. (478 aa)    
Predicted Functional Partners:
SDD43259.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.999
SDD82167.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.999
SDD25218.1
Glutamate synthase (NADH) large subunit.
 
  
 0.775
SDE73116.1
Signal transduction histidine kinase.
  
 0.767
SDE68027.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
  
 
 0.756
SDE68424.1
Two-component system, unclassified family, sensor histidine kinase and response regulator.
  
 0.753
SDD31355.1
Hypothetical protein.
 
 0.698
SDC03378.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.684
SDE01418.1
GAF domain-containing protein.
    
 0.682
SDE60624.1
PAS domain S-box-containing protein.
   
 0.682
Your Current Organism:
Acidovorax valerianellae
NCBI taxonomy Id: 187868
Other names: A. valerianellae, Acidivorax valerianellae, Acidovorax valerianellae Gardan et al. 2003, CFBP 4730, DSM 16619, NCPPB 4283
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.