Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE03751.1 | SDE21109.1 | SAMN05192589_111144 | SAMN05192589_113148 | Hypothetical protein. | ATP synthase in type III secretion protein N. | 0.454 |
SDE03751.1 | SDE46030.1 | SAMN05192589_111144 | SAMN05192589_11813 | Hypothetical protein. | Flagellar hook protein FlgE. | 0.451 |
SDE03751.1 | SDE47588.1 | SAMN05192589_111144 | SAMN05192589_11851 | Hypothetical protein. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.457 |
SDE03751.1 | SDE47753.1 | SAMN05192589_111144 | SAMN05192589_11855 | Hypothetical protein. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.448 |
SDE03751.1 | SDE47878.1 | SAMN05192589_111144 | SAMN05192589_11858 | Hypothetical protein. | Flagellum-specific ATP synthase. | 0.454 |
SDE03751.1 | SDE48049.1 | SAMN05192589_111144 | SAMN05192589_11862 | Hypothetical protein. | Flagellar motor switch protein FliM. | 0.450 |
SDE03751.1 | fliE | SAMN05192589_111144 | SAMN05192589_11854 | Hypothetical protein. | Flagellar hook-basal body complex protein FliE. | 0.460 |
SDE21109.1 | SDE03751.1 | SAMN05192589_113148 | SAMN05192589_111144 | ATP synthase in type III secretion protein N. | Hypothetical protein. | 0.454 |
SDE21109.1 | SDE46030.1 | SAMN05192589_113148 | SAMN05192589_11813 | ATP synthase in type III secretion protein N. | Flagellar hook protein FlgE. | 0.942 |
SDE21109.1 | SDE47588.1 | SAMN05192589_113148 | SAMN05192589_11851 | ATP synthase in type III secretion protein N. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.902 |
SDE21109.1 | SDE47753.1 | SAMN05192589_113148 | SAMN05192589_11855 | ATP synthase in type III secretion protein N. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.947 |
SDE21109.1 | SDE47878.1 | SAMN05192589_113148 | SAMN05192589_11858 | ATP synthase in type III secretion protein N. | Flagellum-specific ATP synthase. | 0.580 |
SDE21109.1 | SDE48049.1 | SAMN05192589_113148 | SAMN05192589_11862 | ATP synthase in type III secretion protein N. | Flagellar motor switch protein FliM. | 0.911 |
SDE21109.1 | fliE | SAMN05192589_113148 | SAMN05192589_11854 | ATP synthase in type III secretion protein N. | Flagellar hook-basal body complex protein FliE. | 0.872 |
SDE46030.1 | SDE03751.1 | SAMN05192589_11813 | SAMN05192589_111144 | Flagellar hook protein FlgE. | Hypothetical protein. | 0.451 |
SDE46030.1 | SDE21109.1 | SAMN05192589_11813 | SAMN05192589_113148 | Flagellar hook protein FlgE. | ATP synthase in type III secretion protein N. | 0.942 |
SDE46030.1 | SDE47588.1 | SAMN05192589_11813 | SAMN05192589_11851 | Flagellar hook protein FlgE. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.987 |
SDE46030.1 | SDE47753.1 | SAMN05192589_11813 | SAMN05192589_11855 | Flagellar hook protein FlgE. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.997 |
SDE46030.1 | SDE47878.1 | SAMN05192589_11813 | SAMN05192589_11858 | Flagellar hook protein FlgE. | Flagellum-specific ATP synthase. | 0.955 |
SDE46030.1 | SDE48049.1 | SAMN05192589_11813 | SAMN05192589_11862 | Flagellar hook protein FlgE. | Flagellar motor switch protein FliM. | 0.989 |
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