Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC49449.1 | SDE64558.1 | SAMN05192589_102307 | SAMN05192589_12365 | Hypothetical protein. | Ribbon-helix-helix protein, copG family. | 0.964 |
SDC74218.1 | SDD80461.1 | SAMN05192589_103123 | SAMN05192589_10980 | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.598 |
SDC74218.1 | SDE64558.1 | SAMN05192589_103123 | SAMN05192589_12365 | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | Ribbon-helix-helix protein, copG family. | 0.489 |
SDC74218.1 | SDE67952.1 | SAMN05192589_103123 | SAMN05192589_1259 | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | L-glutamine synthetase. | 0.612 |
SDC74218.1 | proA | SAMN05192589_103123 | SAMN05192589_104440 | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.999 |
SDC74218.1 | proC | SAMN05192589_103123 | SAMN05192589_11133 | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.844 |
SDD45145.1 | SDD80461.1 | SAMN05192589_106175 | SAMN05192589_10980 | Aminomethyltransferase. | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.864 |
SDD45145.1 | SDE64558.1 | SAMN05192589_106175 | SAMN05192589_12365 | Aminomethyltransferase. | Ribbon-helix-helix protein, copG family. | 0.438 |
SDD45145.1 | SDE67952.1 | SAMN05192589_106175 | SAMN05192589_1259 | Aminomethyltransferase. | L-glutamine synthetase. | 0.895 |
SDD45145.1 | gcvH | SAMN05192589_106175 | SAMN05192589_106176 | Aminomethyltransferase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
SDD80461.1 | SDC74218.1 | SAMN05192589_10980 | SAMN05192589_103123 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.598 |
SDD80461.1 | SDD45145.1 | SAMN05192589_10980 | SAMN05192589_106175 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Aminomethyltransferase. | 0.864 |
SDD80461.1 | SDE64558.1 | SAMN05192589_10980 | SAMN05192589_12365 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Ribbon-helix-helix protein, copG family. | 0.436 |
SDD80461.1 | SDE67952.1 | SAMN05192589_10980 | SAMN05192589_1259 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | L-glutamine synthetase. | 0.940 |
SDD80461.1 | gcvH | SAMN05192589_10980 | SAMN05192589_106176 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.861 |
SDD80461.1 | proA | SAMN05192589_10980 | SAMN05192589_104440 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.899 |
SDE64558.1 | SDC49449.1 | SAMN05192589_12365 | SAMN05192589_102307 | Ribbon-helix-helix protein, copG family. | Hypothetical protein. | 0.964 |
SDE64558.1 | SDC74218.1 | SAMN05192589_12365 | SAMN05192589_103123 | Ribbon-helix-helix protein, copG family. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.489 |
SDE64558.1 | SDD45145.1 | SAMN05192589_12365 | SAMN05192589_106175 | Ribbon-helix-helix protein, copG family. | Aminomethyltransferase. | 0.438 |
SDE64558.1 | SDD80461.1 | SAMN05192589_12365 | SAMN05192589_10980 | Ribbon-helix-helix protein, copG family. | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.436 |
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