Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MSIBF_04565 | ODS42229.1 | MSIBF_04565 | MSIBF_02520 | Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.438 |
| ODS42229.1 | MSIBF_04565 | MSIBF_02520 | MSIBF_04565 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.438 |
| ODS42229.1 | ODS42230.1 | MSIBF_02520 | MSIBF_02525 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.926 |
| ODS42229.1 | ODS42231.1 | MSIBF_02520 | MSIBF_02530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.414 |
| ODS42229.1 | ODS42663.1 | MSIBF_02520 | MSIBF_05005 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Chromosomal replication initiator protein DnaA; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.407 |
| ODS42229.1 | pckG | MSIBF_02520 | MSIBF_02515 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle. | 0.539 |
| ODS42230.1 | ODS42229.1 | MSIBF_02525 | MSIBF_02520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.926 |
| ODS42230.1 | ODS42231.1 | MSIBF_02525 | MSIBF_02530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.414 |
| ODS42230.1 | pckG | MSIBF_02525 | MSIBF_02515 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle. | 0.539 |
| ODS42231.1 | ODS42229.1 | MSIBF_02530 | MSIBF_02520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.414 |
| ODS42231.1 | ODS42230.1 | MSIBF_02530 | MSIBF_02525 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.414 |
| ODS42663.1 | ODS42229.1 | MSIBF_05005 | MSIBF_02520 | Chromosomal replication initiator protein DnaA; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.407 |
| pckG | ODS42229.1 | MSIBF_02515 | MSIBF_02520 | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.539 |
| pckG | ODS42230.1 | MSIBF_02515 | MSIBF_02525 | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.539 |