STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dosC_1Diguanylate cyclase DosC. (372 aa)    
Predicted Functional Partners:
dosP_4
Oxygen sensor protein DosP.
 0.999
cph2
Bacteriophytochrome cph2.
 0.994
dosP_3
Oxygen sensor protein DosP.
 0.977
dosC_2
Diguanylate cyclase DosC.
 
 
 0.974
ydeH
Diguanylate cyclase YdeH.
 
 0.969
ydaM
Probable diguanylate cyclase YdaM.
 
0.967
gmr_2
Cyclic di-GMP phosphodiesterase Gmr.
 
 0.945
gmr_4
Cyclic di-GMP phosphodiesterase Gmr.
 0.938
yjcC_2
Uncharacterized membrane protein YjcC.
 0.937
yjcC_1
Uncharacterized membrane protein YjcC.
 0.934
Your Current Organism:
Mitsuokella jalaludinii
NCBI taxonomy Id: 187979
Other names: ATCC BAA-307, DSM 13811, JCM 12226, M. jalaludinii, Mitsuokella jalaludinii Lan et al. 2002, strain M 9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.