Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUN97687.1 | rbgA | ERS852385_01830 | ERS852385_01831 | Intracellular proteinase inhibitor. | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.542 |
CUN97687.1 | rnhB | ERS852385_01830 | ERS852385_01832 | Intracellular proteinase inhibitor. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.542 |
CUN97687.1 | ytfL_1 | ERS852385_01830 | ERS852385_01829 | Intracellular proteinase inhibitor. | Putative Mg2+ and Co2+ transporter CorB. | 0.516 |
rbgA | CUN97687.1 | ERS852385_01831 | ERS852385_01830 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Intracellular proteinase inhibitor. | 0.542 |
rbgA | rnhB | ERS852385_01831 | ERS852385_01832 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.877 |
rnhB | CUN97687.1 | ERS852385_01832 | ERS852385_01830 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Intracellular proteinase inhibitor. | 0.542 |
rnhB | rbgA | ERS852385_01832 | ERS852385_01831 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.877 |
ytfL_1 | CUN97687.1 | ERS852385_01829 | ERS852385_01830 | Putative Mg2+ and Co2+ transporter CorB. | Intracellular proteinase inhibitor. | 0.516 |