STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygaZInner membrane protein YgaZ. (268 aa)    
Predicted Functional Partners:
CUO04007.1
Predicted membrane protein.
 
 
 0.993
braC
Leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein precursor.
     
 0.623
livH_1
LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family.
    
  0.622
livH_2
LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family.
    
  0.622
brnQ_1
LIV-II; Component of the transport system for branched-chain amino acids.
   
 
  0.508
brnQ_2
LIV-II; Component of the transport system for branched-chain amino acids.
   
 
  0.508
CUO03944.1
Na+/alanine symporter.
       0.498
Your Current Organism:
Mitsuokella jalaludinii
NCBI taxonomy Id: 187979
Other names: ATCC BAA-307, DSM 13811, JCM 12226, M. jalaludinii, Mitsuokella jalaludinii Lan et al. 2002, strain M 9
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