STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTE98228.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)    
Predicted Functional Partners:
OTE98229.1
Flotillin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.947
OTE98227.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.944
OTE98156.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.721
OTE98226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.513
BCS42_10360
AAA family ATPase; Metagenomic.
    
  0.494
OTE96830.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.494
OTE95282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.494
OTE95713.1
HflK protein; HflC and HflK could encode or regulate a protease.
     
 0.428
OTE95714.1
HflC protein; HflC and HflK could regulate a protease.
     
 0.428
OTE98155.1
Paraslipin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.428
Your Current Organism:
Crenothrix sp. D3
NCBI taxonomy Id: 1880899
Other names: C. sp. D3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.