OTE96142.1 protein (Crenothrix sp. D3) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

OTE96142.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (865 aa)

Predicted Functional Partners:

OTE96154.1

0.779

OTE98249.1

0.733

OTE97496.1

0.726

OTE95425.1

0.702

OTE95504.1

0.702

OTE97428.1

0.702

OTE96766.1

0.702

OTE96769.1

0.702

OTE98242.1

0.599

OTE96140.1

0.560

Your Current Organism:

Crenothrix sp. D3

NCBI taxonomy Id: 1880899
Other names: C. sp. D3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OTE95425.1	OTE95504.1	BCS42_00580	BCS42_01025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
OTE95425.1	OTE96142.1	BCS42_00580	BCS42_07515	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
OTE95425.1	OTE96766.1	BCS42_00580	BCS42_12985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.988
OTE95425.1	OTE96769.1	BCS42_00580	BCS42_13005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.986
OTE95425.1	OTE97428.1	BCS42_00580	BCS42_05310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.986
OTE95425.1	OTE98242.1	BCS42_00580	BCS42_03005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
OTE95425.1	OTE98249.1	BCS42_00580	BCS42_07615	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.995
OTE95504.1	OTE95425.1	BCS42_01025	BCS42_00580	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.986
OTE95504.1	OTE96142.1	BCS42_01025	BCS42_07515	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
OTE95504.1	OTE96766.1	BCS42_01025	BCS42_12985	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.987
OTE95504.1	OTE96769.1	BCS42_01025	BCS42_13005	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.986
OTE95504.1	OTE97428.1	BCS42_01025	BCS42_05310	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.987
OTE95504.1	OTE98242.1	BCS42_01025	BCS42_03005	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
OTE95504.1	OTE98249.1	BCS42_01025	BCS42_07615	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.995
OTE96140.1	OTE96142.1	BCS42_07500	BCS42_07515	Exo-beta-1,3-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
OTE96140.1	OTE96154.1	BCS42_07500	BCS42_07505	Exo-beta-1,3-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.720
OTE96140.1	OTE97496.1	BCS42_07500	BCS42_05695	Exo-beta-1,3-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucan 1,3-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.	0.689
OTE96142.1	OTE95425.1	BCS42_07515	BCS42_00580	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.702
OTE96142.1	OTE95504.1	BCS42_07515	BCS42_01025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
OTE96142.1	OTE96140.1	BCS42_07515	BCS42_07500	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exo-beta-1,3-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560