STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTE95193.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (783 aa)    
Predicted Functional Partners:
OTE95194.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.979
OTE97773.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family.
    
   0.581
OTE95192.1
Elongation factor-1 alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
OTE95195.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
OTE95191.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.466
rplY
50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
   
   0.408
Your Current Organism:
Crenothrix sp. D3
NCBI taxonomy Id: 1880899
Other names: C. sp. D3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.