OTE97746.1 protein (Crenothrix sp. D3) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OTE97746.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)

Predicted Functional Partners:

OTE97786.1

0.887

OTE96647.1

0.804

OTE97747.1

0.751

htpX

0.566

OTE97564.1

0.490

Your Current Organism:

Crenothrix sp. D3

NCBI taxonomy Id: 1880899
Other names: C. sp. D3

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OTE96647.1	OTE97564.1	BCS42_12300	BCS42_06055	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.447
OTE96647.1	OTE97746.1	BCS42_12300	BCS42_09365	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
OTE97564.1	OTE96647.1	BCS42_06055	BCS42_12300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.447
OTE97564.1	OTE97746.1	BCS42_06055	BCS42_09365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
OTE97564.1	OTE97786.1	BCS42_06055	BCS42_09360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heat shock protein 70 family.	0.453
OTE97746.1	OTE96647.1	BCS42_09365	BCS42_12300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
OTE97746.1	OTE97564.1	BCS42_09365	BCS42_06055	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
OTE97746.1	OTE97747.1	BCS42_09365	BCS42_09370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
OTE97746.1	OTE97786.1	BCS42_09365	BCS42_09360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heat shock protein 70 family.	0.887
OTE97746.1	htpX	BCS42_09365	BCS42_09375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.	0.566
OTE97747.1	OTE97746.1	BCS42_09370	BCS42_09365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
OTE97747.1	OTE97786.1	BCS42_09370	BCS42_09360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heat shock protein 70 family.	0.468
OTE97747.1	htpX	BCS42_09370	BCS42_09375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.	0.592
OTE97786.1	OTE97564.1	BCS42_09360	BCS42_06055	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heat shock protein 70 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.453
OTE97786.1	OTE97746.1	BCS42_09360	BCS42_09365	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heat shock protein 70 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.887
OTE97786.1	OTE97747.1	BCS42_09360	BCS42_09370	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heat shock protein 70 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.468
OTE97786.1	htpX	BCS42_09360	BCS42_09375	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heat shock protein 70 family.	Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.	0.411
htpX	OTE97746.1	BCS42_09375	BCS42_09365	Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
htpX	OTE97747.1	BCS42_09375	BCS42_09370	Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.592
htpX	OTE97786.1	BCS42_09375	BCS42_09360	Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.	Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heat shock protein 70 family.	0.411