STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTE98114.1MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)    
Predicted Functional Partners:
OTE96481.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.922
OTE98113.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.920
OTE95947.1
NAD(P)H-nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.917
OTE98112.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.862
OTE95818.1
NAD(P)H-nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.849
OTE98115.1
Nitrogenase-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.
       0.788
OTE98116.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.783
BCS42_09785
Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.724
OTE95946.1
Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.664
OTE98117.1
Nitrogenase cofactor biosynthesis protein NifB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.637
Your Current Organism:
Crenothrix sp. D3
NCBI taxonomy Id: 1880899
Other names: C. sp. D3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.