STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCQ98224.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)    
Predicted Functional Partners:
gpmI
Phosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
 0.933
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.836
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
  0.830
OCQ94201.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.828
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.781
OCQ94442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.776
OCQ98470.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.776
OCQ89839.1
Fatty-acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.776
OCQ97646.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.759
OCQ95699.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.759
Your Current Organism:
Nostoc sp. MBR210
NCBI taxonomy Id: 1881015
Other names: N. sp. MBR 210, Nostoc sp. MBR 210
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