STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB65499.1Hypothetical protein. (613 aa)    
Predicted Functional Partners:
SED06534.1
Calcineurin-like phosphoesterase.
  
 0.988
SEE06113.1
Exodeoxyribonuclease I subunit D.
  
 0.988
SED49722.1
ATP-dependent DNA helicase, Rep family.
  
 0.985
SEB65531.1
Hypothetical protein.
 
     0.977
SEB65586.1
Hypothetical protein.
 
     0.977
SEC31581.1
DNA polymerase I.
  
 0.945
SED37547.1
DNA polymerase-1.
  
 0.945
SED17790.1
DNA topoisomerase I.
  
 0.904
SEC80814.1
ATP-dependent DNA helicase RecQ.
  
 0.899
SED69732.1
ATP-dependent DNA helicase RecQ.
  
 0.899
Your Current Organism:
Streptomyces sp. 21331
NCBI taxonomy Id: 1881021
Other names: S. sp. 2133.1, Streptomyces sp. 2133.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.