STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB70994.1DNA-binding transcriptional regulator, LysR family. (297 aa)    
Predicted Functional Partners:
SEB71033.1
CTP synthase.
 
     0.849
SED90402.1
Transcriptional regulator.
  
     0.772
SED31294.1
DNA-binding transcriptional regulator, LysR family.
  
     0.755
SED45076.1
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator.
  
     0.747
SEC15282.1
Transcriptional regulator.
  
     0.742
SEC49273.1
DNA-binding transcriptional regulator, LysR family.
  
     0.708
SED27655.1
Xaa-Pro aminopeptidase.
       0.590
SED06203.1
DNA-binding transcriptional regulator, LysR family.
  
     0.428
Your Current Organism:
Streptomyces sp. 21331
NCBI taxonomy Id: 1881021
Other names: S. sp. 2133.1, Streptomyces sp. 2133.1
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