STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED61434.1Transcriptional regulator, TetR family. (208 aa)    
Predicted Functional Partners:
SED61396.1
Agmatine deiminase.
 
     0.871
SED61319.1
Urease subunit gamma/beta.
       0.752
SED61283.1
Purine-cytosine permease.
 
     0.735
SED61574.1
2-isopropylmalate synthase.
       0.651
SEC50222.1
Hypothetical protein.
       0.590
SED61255.1
Branched chain amino acid aminotransferase apoenzyme.
       0.561
SEC65604.1
HNH endonuclease.
  
     0.543
SED61466.1
Hypothetical protein.
       0.512
SED61358.1
Urease subunit alpha.
       0.509
SEC65650.1
HNH endonuclease.
  
     0.494
Your Current Organism:
Streptomyces sp. 21331
NCBI taxonomy Id: 1881021
Other names: S. sp. 2133.1, Streptomyces sp. 2133.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.