STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED66367.1Hypothetical protein. (1372 aa)    
Predicted Functional Partners:
SEC16382.1
Proteasome-associated ATPase.
    
 0.976
SEC66111.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
   
  0.878
SEB96495.1
Glycerol kinase.
   
 0.873
SEC16926.1
Glycerol kinase.
   
 0.873
SEC16173.1
Proteasome alpha subunit.
    
 0.765
SEC16209.1
Proteasome endopeptidase complex, beta component Threonine peptidase. MEROPS family T01B.
    
 0.765
SED66295.1
Ribosome-binding factor A.
     
 0.763
SEC09407.1
alanyl-tRNA synthetase.
  
 
  0.761
SED05831.1
Aspartate aminotransferase.
    
  0.761
SED66332.1
tRNA pseudouridine55 synthase.
  
  
 0.752
Your Current Organism:
Streptomyces sp. 21331
NCBI taxonomy Id: 1881021
Other names: S. sp. 2133.1, Streptomyces sp. 2133.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.