STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK67148.1DNA-binding transcriptional regulator, GntR family. (224 aa)    
Predicted Functional Partners:
SDL35442.1
DNA-binding transcriptional regulator, GntR family.
  
     0.769
SDK28845.1
DNA-binding transcriptional regulator, GntR family.
  
     0.758
SDL11414.1
Transcriptional regulator, GntR family.
  
     0.754
SDL01758.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.736
SDK49998.1
Transcriptional regulator, GntR family.
  
  
 0.703
SDJ82913.1
Transcriptional regulator, GntR family.
  
  
 0.647
SDL02095.1
Transcriptional regulator, GntR family.
  
  
 0.637
SDK67166.1
Anthranilate synthase component 1/para-aminobenzoate synthetase.
       0.592
SDK67189.1
Anthranilate synthase, component II.
       0.592
SDK53012.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.558
Your Current Organism:
Nocardioides sp. YR527
NCBI taxonomy Id: 1881028
Other names: N. sp. YR527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.