STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP70124.1Tight adherence protein C. (334 aa)    
Predicted Functional Partners:
SEP70097.1
Tight adherence protein B.
 
  
 0.998
SEP70083.1
Pilus assembly protein CpaF.
 
  
 0.991
SEP70012.1
Pilus assembly protein CpaB.
 
  
 0.988
SEP70052.1
Pilus assembly protein CpaE.
 
  
 0.986
SEP70031.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.958
SEP69907.1
Flp pilus assembly protein TadG.
 
    0.893
SEP69963.1
Pilus assembly protein Flp/PilA.
 
  
 0.888
SEP69991.1
Prepilin peptidase CpaA.
 
   
 0.853
SEP69879.1
Flp pilus assembly protein TadG.
 
    0.850
SEP69938.1
Pilus formation protein N terminal region.
 
  
 0.849
Your Current Organism:
Devosia sp. YR412
NCBI taxonomy Id: 1881030
Other names: D. sp. YR412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.