STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ48405.1Peptide/nickel transport system permease protein. (307 aa)    
Predicted Functional Partners:
SEQ48418.1
Peptide/nickel transport system permease protein.
 
  0.966
SEQ48450.1
Peptide/nickel transport system substrate-binding protein.
 
  0.929
SEQ48379.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.883
SEQ10677.1
Peptide/nickel transport system permease protein/oligopeptide transport system permease protein.
 
 
  0.856
SEQ40297.1
Peptide/nickel transport system permease protein.
 
 
  0.854
SEP64110.1
Peptide/nickel transport system permease protein.
 
 
  0.853
SEQ48745.1
Peptide/nickel transport system permease protein.
 
 
  0.852
SEQ49245.1
Peptide/nickel transport system permease protein.
 
 
  0.852
SEP86387.1
Peptide/nickel transport system permease protein.
 
 
  0.834
SEQ37289.1
Peptide/nickel transport system permease protein.
 
 
  0.830
Your Current Organism:
Devosia sp. YR412
NCBI taxonomy Id: 1881030
Other names: D. sp. YR412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.