STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR78145.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
SFR78151.1
Dinuclear metal center protein, YbgI/SA1388 family.
  
  
 0.828
SFR68403.1
META domain-containing protein.
    
   0.694
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
  
 0.499
SFR72965.1
Protein of unknown function.
  
     0.493
SFR77695.1
Proteasome accessory factor B.
  
     0.467
SFR78922.1
Predicted transcriptional regulator.
 
  
  0.466
SFR78156.1
Helix-turn-helix domain-containing protein.
       0.450
SFR76532.1
Ribonuclease D.
  
    0.420
SFR76537.1
Protein of unknown function.
  
     0.414
rbpA
RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.408
Your Current Organism:
Agromyces sp. CF514
NCBI taxonomy Id: 1881031
Other names: A. sp. CF514
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