STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT28010.1D-alanyl-D-alanine carboxypeptidase. (326 aa)    
Predicted Functional Partners:
SFS82246.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.882
SFS82506.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
     
 0.882
SFT27475.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
     
 0.882
SFS62468.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
     
 0.871
SFS65509.1
D-alanyl-D-alanine carboxypeptidase.
  
  
 
0.772
SFT13163.1
D-alanyl-D-alanine dipeptidase/carboxypeptidase.
  
  
 
0.772
SFT13539.1
D-Ala-D-Ala carboxypeptidase. Metallo peptidase. MEROPS family M15B.
  
  
 
0.772
SFS68013.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.698
ddl-2
D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
  
 0.587
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
  
 0.584
Your Current Organism:
Paenibacillus sp. BC26
NCBI taxonomy Id: 1881032
Other names: P. sp. BC26
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.