STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL70325.1Protein of unknown function. (235 aa)    
Predicted Functional Partners:
SHL59159.1
Vibriolysin Metallo peptidase. MEROPS family M04; Extracellular zinc metalloprotease.
   
 0.828
SHL70267.1
Hypothetical protein.
 
     0.757
purN
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
    
  0.729
SHM07889.1
DNA translocase FtsK.
    
   0.723
SHM41223.1
MJ0042 family finger-like domain-containing protein.
  
     0.712
SHM31082.1
Mannosyl-oligosaccharide alpha-1,2-mannosidase/ER degradation enhancer, mannosidase alpha-like 2.
    
   0.675
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
       0.652
SHL68608.1
Flagellar FliJ protein.
  
     0.594
SHM20935.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
    
 0.592
SHL63682.1
YXWGXW repeat-containing protein.
  
 0.578
Your Current Organism:
Rhodanobacter sp. OK091
NCBI taxonomy Id: 1881037
Other names: R. sp. OK091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.