STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN62188.1comF family protein. (281 aa)    
Predicted Functional Partners:
SEN64332.1
DNA processing protein.
 
 
 0.953
SEN89944.1
Competence protein ComEC.
 
  
 0.952
SEO16918.1
DNA replication and repair protein RadC; Belongs to the UPF0758 family.
 
    0.921
SEN68774.1
Signal transduction histidine kinase.
  
  
 0.892
SEN50410.1
Prephenate dehydrogenase.
   
  
 0.887
SEN52048.1
N-acetylglucosamine-6-phosphate deacetylase.
  
    0.886
SEN20030.1
TRSP domain C terminus to PRTase_2.
   
    0.872
SEN91828.1
PAS domain S-box-containing protein.
  
  
 0.859
SEN68808.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
    0.854
SEO23899.1
Magnesium chelatase family protein.
 
  
 0.854
Your Current Organism:
Duganella sp. CF517
NCBI taxonomy Id: 1881038
Other names: D. sp. CF517
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.