STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO28376.1Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family. (352 aa)    
Predicted Functional Partners:
SEO28366.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
SEO28345.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.992
SEO28397.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.986
SEO16864.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.971
SEN90340.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.969
SEO28415.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
  
  0.963
SEO16828.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.955
SEO16814.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.944
SEO28332.1
Long-chain acyl-CoA synthetase.
 
    0.941
SEN90302.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.938
Your Current Organism:
Duganella sp. CF517
NCBI taxonomy Id: 1881038
Other names: D. sp. CF517
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