STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW10141.1Aspartate aminotransferase. (419 aa)    
Predicted Functional Partners:
SEW11083.1
Glutamate synthase (NADH) large subunit.
    
 0.900
SEW38495.1
Aspartate kinase; Manually curated.
  
 0.893
SEV90737.1
Aspartate aminotransferase.
  
  
 
0.890
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.884
SEV94204.1
Argininosuccinate synthase.
   
 0.883
SEW19609.1
Aspartate aminotransferase.
  
  
 
0.877
SEW38140.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.876
SEW23664.1
Prephenate dehydrogenase.
    
 0.874
SEW38504.1
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.871
SEW23646.1
Prephenate dehydratase.
 
 
 0.869
Your Current Organism:
Chitinophaga sp. YR573
NCBI taxonomy Id: 1881040
Other names: C. sp. YR573
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.