STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW37876.1TonB-dependent receptor. (924 aa)    
Predicted Functional Partners:
SEW37884.1
Hypothetical protein.
 
     0.943
SEW37885.1
Hypothetical protein.
 
     0.855
SEW37873.1
Tetratricopeptide repeat-containing protein.
 
     0.824
SEW43321.1
Hypothetical protein.
 
     0.781
SEW44282.1
Hypothetical protein.
  
     0.689
SEW06035.1
Carboxypeptidase regulatory-like domain-containing protein.
  
    0.686
SEW20200.1
Hypothetical protein.
  
     0.678
SEW06044.1
Hypothetical protein.
  
     0.631
SEW18111.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
  0.615
SEV92086.1
Transposase zinc-ribbon domain-containing protein.
  
     0.583
Your Current Organism:
Chitinophaga sp. YR573
NCBI taxonomy Id: 1881040
Other names: C. sp. YR573
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