Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEW01362.1 | SEW25497.1 | SAMN05428988_1256 | SAMN05428988_3643 | Starch phosphorylase. | Alpha-amylase. | 0.840 |
SEW01362.1 | SEW34366.1 | SAMN05428988_1256 | SAMN05428988_4119 | Starch phosphorylase. | Maltooligosyl trehalose synthase. | 0.808 |
SEW01362.1 | SEW34368.1 | SAMN05428988_1256 | SAMN05428988_4120 | Starch phosphorylase. | Oligo-1,6-glucosidase. | 0.703 |
SEW01362.1 | SEW40347.1 | SAMN05428988_1256 | SAMN05428988_5284 | Starch phosphorylase. | Starch synthase. | 0.922 |
SEW01362.1 | SEW44620.1 | SAMN05428988_1256 | SAMN05428988_5815 | Starch phosphorylase. | Glucose-1-phosphate adenylyltransferase. | 0.988 |
SEW01362.1 | SEW46622.1 | SAMN05428988_1256 | SAMN05428988_6443 | Starch phosphorylase. | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | 0.843 |
SEW01362.1 | glgA | SAMN05428988_1256 | SAMN05428988_5814 | Starch phosphorylase. | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.932 |
SEW01362.1 | glgB | SAMN05428988_1256 | SAMN05428988_4894 | Starch phosphorylase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.993 |
SEW25497.1 | SEW01362.1 | SAMN05428988_3643 | SAMN05428988_1256 | Alpha-amylase. | Starch phosphorylase. | 0.840 |
SEW25497.1 | SEW34366.1 | SAMN05428988_3643 | SAMN05428988_4119 | Alpha-amylase. | Maltooligosyl trehalose synthase. | 0.848 |
SEW25497.1 | SEW34368.1 | SAMN05428988_3643 | SAMN05428988_4120 | Alpha-amylase. | Oligo-1,6-glucosidase. | 0.819 |
SEW25497.1 | SEW40347.1 | SAMN05428988_3643 | SAMN05428988_5284 | Alpha-amylase. | Starch synthase. | 0.682 |
SEW25497.1 | SEW44620.1 | SAMN05428988_3643 | SAMN05428988_5815 | Alpha-amylase. | Glucose-1-phosphate adenylyltransferase. | 0.633 |
SEW25497.1 | SEW46622.1 | SAMN05428988_3643 | SAMN05428988_6443 | Alpha-amylase. | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | 0.922 |
SEW25497.1 | glgA | SAMN05428988_3643 | SAMN05428988_5814 | Alpha-amylase. | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.720 |
SEW25497.1 | glgB | SAMN05428988_3643 | SAMN05428988_4894 | Alpha-amylase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.899 |
SEW29636.1 | SEW46622.1 | SAMN05428988_4098 | SAMN05428988_6443 | Leucine rich repeat-containing protein. | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | 0.826 |
SEW29636.1 | glgB | SAMN05428988_4098 | SAMN05428988_4894 | Leucine rich repeat-containing protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.951 |
SEW34366.1 | SEW01362.1 | SAMN05428988_4119 | SAMN05428988_1256 | Maltooligosyl trehalose synthase. | Starch phosphorylase. | 0.808 |
SEW34366.1 | SEW25497.1 | SAMN05428988_4119 | SAMN05428988_3643 | Maltooligosyl trehalose synthase. | Alpha-amylase. | 0.848 |
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