STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL00626.1GAF domain-containing protein. (175 aa)    
Predicted Functional Partners:
SEL16449.1
GAF sensor hybrid histidine kinase.
 
 0.975
SEL61997.1
Response regulator receiver domain-containing protein.
  
 0.908
SEL94702.1
PAS domain S-box-containing protein.
 
 0.863
SEL48502.1
Hpt sensor hybrid histidine kinase.
   
 0.861
SEM08640.1
PAS domain S-box-containing protein.
 
 0.853
SEM11385.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.852
SEM46037.1
PAS domain S-box-containing protein.
  
 0.852
SEL94799.1
PAS domain S-box-containing protein.
  
 0.850
SEM27299.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.848
SEL57098.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 0.837
Your Current Organism:
Pseudoxanthomonas sp. GM95
NCBI taxonomy Id: 1881043
Other names: P. sp. GM95
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.